Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901853.1_cds_XP_016451894.1_46191
CDS Infomation

[gene=LOC107776501] [db_xref=GeneID:107776501] [protein=CCA-adding enzyme-like isoform X3] [protein_id=XP_016451894.1] [location=join(55304..55352,59265..59362,59466..59549,60307..60443,62383..62455,62572..62617,64318..64427,64630..64737,64835..64894,65175..65236,66840..67152,68283..69167)] [gbkey=CDS]
Sequence

ATGATACCACCATCTGCATGGGTTGTTCTGAAGATTTTGCAGAGTGAAGGGTTTGAAGCA
TACTTGGTTGGTGGATGTGTCAGAGATCTAATTCTCAATAGAATACCAAAAGACTTTGAT
ATAATCACAAATGCAAAACTTCCACAGATTAAAAAGCAATTTCATCGTTCCCAAATAGTT
GGACAAAGGTTTCCGATATGTAGAGTACATGTCAAAGGATCTGTTATAGAGGTATCAAGT
TTTGATACTGTGGCAAAGAATGCTGAAAAGGAAGAGGAAATCTTTGTTCCTAAAATGCCT
AAGGGATGTGATCAGAAAGATTTCATTCTCTGGAAGAATTCCATGCACAGAGATTTCACT
ATTAACAGCTTATTTTTCAATCCGTTGATGAATAGAATCTATGATTATGTCAATGCAATG
CAGGACCTAAGATCCTTAAAGCTGCGGACTTTAGTACCCACTCACTTGTCGTTTGGAGAG
GATTGTGCAAGAATTTTGCGCGGCTTGAGATTGGCTGCTCGTCTTAACTTATCCTTTACA
AAGGAGATAGAAGATTGGATGGATGAATTTTCATCATCCATCATGAGCTTGTCCAAGGCT
AGAATAAGGATGGAACTAAATTATATGATGTCATATGGGGCTGCGGCACCTTCTCTTTCT
TTACTTCAGAGATACAATATACTTGAGATTGTGTTTCCATTTCATGGAGCATACCTTGCT
CAACAGGCTTGCAAACAATTGGGTGACAGTTCTGTGATGCTGATGAAACTATTTTCCAGC
TTGGATCAATTTGTCACCTGCGGTCAACCTTCGCATGATAGTGTGTGGGTTGCACTCTTG
GCGTTTCATCTGGCATTGATCACTCATCCTCAACATGCGCTTGTCATCCTGACTTTTGCT
TCTGTATTGTATCATGGAAATTGGAAGGAAGGTGTTAAATTTGCAGAGAAGCATTCTGAA
GCTGCAGCTGTGTATGTACCTGAAGTCTCTGATTCTCAAGTCTCCATTTCAGATGATGAA
CTTGCAGAAAGAGTTGCACAACTGGCAGTGCAAGTACAAAAATCTATAAACATTTTAACT
GACGGGGACAGCCTCCTGGAAGCAATGTCCAAGTTCCCAGGAGCCCCATACTCTGGTTTG
GTCTTTGTATCAATGAGAATGGGCAAAGATGTCGAACTTATGTTTGACATTCTGGTGAAA
GATGTTACATCTTTCAAAACCAGTAAGAAGAATTTCAAGATAGATTACGATTCTCTTGGG
AAAGGACACGTGTGTGAGACAAGGTTCCTTCTCGGCAAAGTCATCCTTGATACCATAGTT
CCTGGAGTCTCCACAGGTGTTGAAGTGATCGAAGCGGAGAAACATGTCCTGCTTGAAGGT
GATGGTCAACAGGAGGAAGATACTTCCCAGGAGACTTTCCATGGAAATGTGGAGCTAATG
AAGCCGGAGTATGTGTCTGAAGACAATAGTGATCTTGATGAAAATTATGAATTGCAACAC
AATAGAATTGAGAAGCAAAAGTTAAATCAGAAGGGATGCAGTGATTTAGTGGAGGCAGTA
ACCAAGAAGCAGAAGATCGTTGCTGCTGAGCACTCTGAGGAGATGGCTCTCAAGAAGCAA
GATTTGATTGATGATACAGATTTTCTTAGTCAAGAACTGGATAGAGGGGATACTGTAACT
AAGAAGAAAATTAAGGGTACGCGTACGCAGCTGTTTAAGGATGAAATAAGGATGCTGCTG
GAAGAGGTGAAACTACACTGTTGTGATGTTACAGGAAAGGATAAAAAGGATGATGAGAAT
TCACAAAAGACATCTATTAACCATTTGAACCTTTTGATGAAAGATGTGGCTATTAAAGAT
CACAAGTTTACAAAGAAGCATGATTCTTTGCATGAACATAGTATTGAAGAAGTAAATGAG
AAGTTTGATAGTAAAAACAATAACTCTCAGGGGAAGAATTTGGCTTCAGCTGAGAAGGGC
AAACAAAAAGCTAGCACACAGACACTTTCAGCTCTTTTTAGGTGA

Peptide Sequence

PEP ID

XP_016451894.1
PEP Infomation

PREDICTED: CCA-adding enzyme-like isoform X3 [Nicotiana tabacum]
Sequence

MIPPSAWVVLKILQSEGFEAYLVGGCVRDLILNRIPKDFDIITNAKLPQIKKQFHRSQIV
GQRFPICRVHVKGSVIEVSSFDTVAKNAEKEEEIFVPKMPKGCDQKDFILWKNSMHRDFT
INSLFFNPLMNRIYDYVNAMQDLRSLKLRTLVPTHLSFGEDCARILRGLRLAARLNLSFT
KEIEDWMDEFSSSIMSLSKARIRMELNYMMSYGAAAPSLSLLQRYNILEIVFPFHGAYLA
QQACKQLGDSSVMLMKLFSSLDQFVTCGQPSHDSVWVALLAFHLALITHPQHALVILTFA
SVLYHGNWKEGVKFAEKHSEAAAVYVPEVSDSQVSISDDELAERVAQLAVQVQKSINILT
DGDSLLEAMSKFPGAPYSGLVFVSMRMGKDVELMFDILVKDVTSFKTSKKNFKIDYDSLG
KGHVCETRFLLGKVILDTIVPGVSTGVEVIEAEKHVLLEGDGQQEEDTSQETFHGNVELM
KPEYVSEDNSDLDENYELQHNRIEKQKLNQKGCSDLVEAVTKKQKIVAAEHSEEMALKKQ
DLIDDTDFLSQELDRGDTVTKKKIKGTRTQLFKDEIRMLLEEVKLHCCDVTGKDKKDDEN
SQKTSINHLNLLMKDVAIKDHKFTKKHDSLHEHSIEEVNEKFDSKNNNSQGKNLASAEKG
KQKASTQTLSALFR

Transcript Sequence

Gene sequence data has not been registered.